utils

Common utilities.

Modules:

• amber –

  Utilities for working with Amber files and objects.

• geometry –

  Common functions for computing the internal coordinates (e.g. bond lengths).

• logging –

  Utilities to setup logging

• models –

  Common pydantic helpers.

• mpi –

  Utilities for interacting with MPI.

• openmm –

  Utilities for manipulating OpenMM objects.